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Microbiome-parasite relationships in lamb in response to pasture management / JACK JEFFERSON

Swansea University Author: JACK JEFFERSON

  • E-Thesis – open access under embargo until: 25th May 2026

Abstract

Lambs and most ruminants with outdoor access are vulnerable to parasitic infections which significantly reduces feed intake, hinders growth, increases mortality rates. In farming environments, this negatively impacts carcass quality, wool growth, fertility, and milk yield.With resistance to anthelmi...

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Published: Swansea University, Wales, UK 2025
Institution: Swansea University
Degree level: Master of Research
Degree name: MRes
Supervisor: Wells, K., and Webster, T.
URI: https://cronfa.swan.ac.uk/Record/cronfa70376
first_indexed 2025-09-17T16:02:06Z
last_indexed 2025-12-05T18:06:37Z
id cronfa70376
recordtype RisThesis
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spelling 2025-12-04T09:49:09.1061270 v2 70376 2025-09-17 Microbiome-parasite relationships in lamb in response to pasture management 13258200424e31653e0219c1d5c462f6 JACK JEFFERSON JACK JEFFERSON true false 2025-09-17 Lambs and most ruminants with outdoor access are vulnerable to parasitic infections which significantly reduces feed intake, hinders growth, increases mortality rates. In farming environments, this negatively impacts carcass quality, wool growth, fertility, and milk yield.With resistance to anthelmintics growing among parasites, alternative studies of improving parasitic resistance in sheep must be explored. This study investigated the effects of pasture type, seasonal variation, and parasitic influences on the rumen microbiome composition and diversity in lambs. Twenty one lambs were divided into two dietary treatment groups:ryegrass-dominated pastures (R) and mixed sward pastures (S). Fecal samples were collected monthly over a three-month grazing period and analyzed using 16S rRNA gene sequencing to assess microbial diversity and community composition.The results showed that alpha diversity, measured by Shannon and Chao1 indices,significantly increased over time in lambs grazing on ryegrass pastures, while no significant changes were observed for lambs on mixed sward pastures, though trends of increasing diversity were noted. Beta diversity analysis revealed distinct microbial community structures between treatments, with seasonal shifts in the relative abundance of key bacterial taxa, such as Akkermansia, Oscillospiraceae, and Ruminococcus. These changes were strongly influenced by pasture type and seasonal resource availability.Parasitic interactions also played a role in shaping the microbiome, with low coccidia counts associated with reduced microbial diversity, while strongyle and Nematodirus egg counts showed no significant effects. These findings highlight the complex interplay between diet, seasonality, and parasitism in driving microbiome dynamics.This study provides valuable insights into how pasture management practices and parasitic infections influence gastrointestinal microbiome diversity and composition. Future research should explore the functional implications of these microbial shifts on lamb health and productivity, incorporating long-term monitoring and performance metrics such as growthrates and immune function E-Thesis Swansea University, Wales, UK Microbiome, parasites, pasture diet, lambs, ruminants 25 5 2025 2025-05-25 A selection of content is redacted or is partially redacted from this thesis to protect sensitive and personal information. COLLEGE NANME COLLEGE CODE Swansea University Wells, K., and Webster, T. Master of Research MRes Ecological Continuity Trust Ecological Continuity Trust 2025-12-04T09:49:09.1061270 2025-09-17T15:43:21.6557879 Faculty of Science and Engineering School of Biosciences, Geography and Physics - Biosciences JACK JEFFERSON 1 Under embargo Under embargo 2025-09-17T17:01:41.1137095 Output 16126820 application/pdf E-Thesis – open access true 2026-05-25T00:00:00.0000000 Copyright: The author, Jack Jefferson, 2024 true eng
title Microbiome-parasite relationships in lamb in response to pasture management
spellingShingle Microbiome-parasite relationships in lamb in response to pasture management
JACK JEFFERSON
title_short Microbiome-parasite relationships in lamb in response to pasture management
title_full Microbiome-parasite relationships in lamb in response to pasture management
title_fullStr Microbiome-parasite relationships in lamb in response to pasture management
title_full_unstemmed Microbiome-parasite relationships in lamb in response to pasture management
title_sort Microbiome-parasite relationships in lamb in response to pasture management
author_id_str_mv 13258200424e31653e0219c1d5c462f6
author_id_fullname_str_mv 13258200424e31653e0219c1d5c462f6_***_JACK JEFFERSON
author JACK JEFFERSON
author2 JACK JEFFERSON
format E-Thesis
publishDate 2025
institution Swansea University
college_str Faculty of Science and Engineering
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hierarchy_top_id facultyofscienceandengineering
hierarchy_top_title Faculty of Science and Engineering
hierarchy_parent_id facultyofscienceandengineering
hierarchy_parent_title Faculty of Science and Engineering
department_str School of Biosciences, Geography and Physics - Biosciences{{{_:::_}}}Faculty of Science and Engineering{{{_:::_}}}School of Biosciences, Geography and Physics - Biosciences
document_store_str 0
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description Lambs and most ruminants with outdoor access are vulnerable to parasitic infections which significantly reduces feed intake, hinders growth, increases mortality rates. In farming environments, this negatively impacts carcass quality, wool growth, fertility, and milk yield.With resistance to anthelmintics growing among parasites, alternative studies of improving parasitic resistance in sheep must be explored. This study investigated the effects of pasture type, seasonal variation, and parasitic influences on the rumen microbiome composition and diversity in lambs. Twenty one lambs were divided into two dietary treatment groups:ryegrass-dominated pastures (R) and mixed sward pastures (S). Fecal samples were collected monthly over a three-month grazing period and analyzed using 16S rRNA gene sequencing to assess microbial diversity and community composition.The results showed that alpha diversity, measured by Shannon and Chao1 indices,significantly increased over time in lambs grazing on ryegrass pastures, while no significant changes were observed for lambs on mixed sward pastures, though trends of increasing diversity were noted. Beta diversity analysis revealed distinct microbial community structures between treatments, with seasonal shifts in the relative abundance of key bacterial taxa, such as Akkermansia, Oscillospiraceae, and Ruminococcus. These changes were strongly influenced by pasture type and seasonal resource availability.Parasitic interactions also played a role in shaping the microbiome, with low coccidia counts associated with reduced microbial diversity, while strongyle and Nematodirus egg counts showed no significant effects. These findings highlight the complex interplay between diet, seasonality, and parasitism in driving microbiome dynamics.This study provides valuable insights into how pasture management practices and parasitic infections influence gastrointestinal microbiome diversity and composition. Future research should explore the functional implications of these microbial shifts on lamb health and productivity, incorporating long-term monitoring and performance metrics such as growthrates and immune function
published_date 2025-05-25T05:27:12Z
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score 11.090071