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Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor. / Lara Martin Sanchez

Swansea University Author: Lara Martin Sanchez

Abstract

"Cytochromes P450 monooxygenases play important roles on oxidative decoration of secondary metabolites in Streptomycetes. Cytochrome P450 158A2 (CYP158A2) and CYP158A1 of Streptomyces coelicolor A3(2) are two of the 18 CYPs that comprise the CYP complement or "CYPome" of S. coelicolor...

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Published: 2009
Institution: Swansea University
Degree level: Master of Philosophy
Degree name: M.Phil
URI: https://cronfa.swan.ac.uk/Record/cronfa42393
first_indexed 2018-08-02T18:54:36Z
last_indexed 2019-10-21T16:47:44Z
id cronfa42393
recordtype RisThesis
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spelling 2018-08-29T14:41:19.0239094 v2 42393 2018-08-02 Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor. 0ee365469c758107070c5a557103e396 NULL Lara Martin Sanchez Lara Martin Sanchez true true 2018-08-02 "Cytochromes P450 monooxygenases play important roles on oxidative decoration of secondary metabolites in Streptomycetes. Cytochrome P450 158A2 (CYP158A2) and CYP158A1 of Streptomyces coelicolor A3(2) are two of the 18 CYPs that comprise the CYP complement or "CYPome" of S. coelicolor A3(2). CYP158A2 catalyzes an unusual oxidative C-C coupling reaction to polymerize flaviolin (a red pigment) into three isomers of biflaviolin and one triflaviolin which are pigments responsible for UV radiation protection in Streptomyces. Although located in a different part of the chromosome, CYP158A1, sharing 61% aminoacid identity with C\T158A2, has also been shown to produce almost identical flaviolin-derived products. The gene scol207 encoding for CYP158A2 was previously deleted and this mutant showed no changes on phenotype with respect to the wild type. Given that the production of the same flaviolin-derived compounds can be achieved as well by CYP158A1, this CYP is thought to be the substitute for CYP158A2 in the biosynthesis of those pigments, enforcing the mechanism for UV protection in these organisms. In order to investigate functional redundancy between CYP158A1 and CYP158A2, PCR-based targeted mutagenesis was carried out to delete the gene sco6998 encoding for CYP158A1 in a wild type strain (to create a single mutant) and in a strain with the gene for CYP158A2 already deleted (to create a double mutant for both genes). Phenotype observation of the mutants and metabolomic studies by mass spectrometry analyses were carried out in order to identify and quantify the amount of flaviolin in every mutant compared to the parental strain. Furthermore UV sensitivity assays were performed to measure the effect of the lack of those pigments. The results obtained will shed light in the understanding of the function of such valuable and diverse proteins as are the CYPs, and highlight the importance of this pathway in the production of novel secondary metabolites with important biological activities." E-Thesis Molecular biology.;Microbiology.;Genetics. 31 12 2009 2009-12-31 COLLEGE NANME Swansea University Medical School COLLEGE CODE Swansea University Master of Philosophy M.Phil 2018-08-29T14:41:19.0239094 2018-08-02T16:24:29.0725813 Faculty of Medicine, Health and Life Sciences Swansea University Medical School - Medicine Lara Martin Sanchez NULL 1 0042393-02082018162450.pdf 10798101.pdf 2018-08-02T16:24:50.8830000 Output 10039746 application/pdf E-Thesis true 2018-08-02T16:24:50.8830000 false
title Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor.
spellingShingle Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor.
Lara Martin Sanchez
title_short Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor.
title_full Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor.
title_fullStr Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor.
title_full_unstemmed Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor.
title_sort Gene deletion studies in analysis of the role of cytochrome P450 in flaviolin metabolism in Streptomyces coelicolor.
author_id_str_mv 0ee365469c758107070c5a557103e396
author_id_fullname_str_mv 0ee365469c758107070c5a557103e396_***_Lara Martin Sanchez
author Lara Martin Sanchez
author2 Lara Martin Sanchez
format E-Thesis
publishDate 2009
institution Swansea University
college_str Faculty of Medicine, Health and Life Sciences
hierarchytype
hierarchy_top_id facultyofmedicinehealthandlifesciences
hierarchy_top_title Faculty of Medicine, Health and Life Sciences
hierarchy_parent_id facultyofmedicinehealthandlifesciences
hierarchy_parent_title Faculty of Medicine, Health and Life Sciences
department_str Swansea University Medical School - Medicine{{{_:::_}}}Faculty of Medicine, Health and Life Sciences{{{_:::_}}}Swansea University Medical School - Medicine
document_store_str 1
active_str 0
description "Cytochromes P450 monooxygenases play important roles on oxidative decoration of secondary metabolites in Streptomycetes. Cytochrome P450 158A2 (CYP158A2) and CYP158A1 of Streptomyces coelicolor A3(2) are two of the 18 CYPs that comprise the CYP complement or "CYPome" of S. coelicolor A3(2). CYP158A2 catalyzes an unusual oxidative C-C coupling reaction to polymerize flaviolin (a red pigment) into three isomers of biflaviolin and one triflaviolin which are pigments responsible for UV radiation protection in Streptomyces. Although located in a different part of the chromosome, CYP158A1, sharing 61% aminoacid identity with C\T158A2, has also been shown to produce almost identical flaviolin-derived products. The gene scol207 encoding for CYP158A2 was previously deleted and this mutant showed no changes on phenotype with respect to the wild type. Given that the production of the same flaviolin-derived compounds can be achieved as well by CYP158A1, this CYP is thought to be the substitute for CYP158A2 in the biosynthesis of those pigments, enforcing the mechanism for UV protection in these organisms. In order to investigate functional redundancy between CYP158A1 and CYP158A2, PCR-based targeted mutagenesis was carried out to delete the gene sco6998 encoding for CYP158A1 in a wild type strain (to create a single mutant) and in a strain with the gene for CYP158A2 already deleted (to create a double mutant for both genes). Phenotype observation of the mutants and metabolomic studies by mass spectrometry analyses were carried out in order to identify and quantify the amount of flaviolin in every mutant compared to the parental strain. Furthermore UV sensitivity assays were performed to measure the effect of the lack of those pigments. The results obtained will shed light in the understanding of the function of such valuable and diverse proteins as are the CYPs, and highlight the importance of this pathway in the production of novel secondary metabolites with important biological activities."
published_date 2009-12-31T07:20:02Z
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score 11.057624

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