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The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)

C. B. Christopher, L. Ji, R. A. W. Wiberg, J. Shelton, E. C. McKinney, D. J. Parker, R. B. Meagher, K. M. Benowitz, E. M. Roy-Zokan, M. G. Ritchie, S. J. Brown, R. J. Schmitz, A. J. Moore, Chris Cunningham Orcid Logo

Genome Biology and Evolution, Volume: 7, Issue: 12, Pages: 3383 - 3396

Swansea University Author: Chris Cunningham Orcid Logo

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DOI (Published version): 10.1093/gbe/evv194

Abstract

Testing for conserved and novelmechanisms underlying phenotypic evolution requires a diversity of genomes available for comparisonspanning multiple independent lineages. For example, complex social behavior in insects has been investigated primarily witheusocial lineages, nearly all of which are Hym...

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Published in: Genome Biology and Evolution
ISSN: 1759-6653
Published: Oxford University Press (OUP) 2015
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If conserved genomic influences on sociality do exist, we need data from awider range of taxa that also vary in their levels of sociality. Here,we present the assembled and annotated genome of the subsocialbeetle Nicrophorus vespilloides, a species long used to investigate evolutionary questions of complex social behavior. We used thisgenome to address two questions. First, do aspects of life history, such as using a carcass to breed, predict overlap in gene modelsmore strongly than phylogeny? We found that the overlap in gene models was similar between N. vespilloides and all other insectgroups regardless of life history. Second, like other insects with highly developed social behavior but unlike other beetles, doesN. vespilloides have DNA methylation?We found strong evidence for an active DNA methylation system. The distribution of methylationwassimilar to other insects with exons having themostmethylatedCpGs. Methylation status appears highly conserved; 85%of themethylated genes in N. vespilloides are alsomethylated in the hymentopteran Nasonia vitripennis. 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spelling 2017-08-14T15:55:51.4760993 v2 32676 2017-03-24 The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae) 0bd688baf9fc30cb39dfae9ed28cb662 0000-0003-3965-2076 Chris Cunningham Chris Cunningham true false 2017-03-24 SBI Testing for conserved and novelmechanisms underlying phenotypic evolution requires a diversity of genomes available for comparisonspanning multiple independent lineages. For example, complex social behavior in insects has been investigated primarily witheusocial lineages, nearly all of which are Hymenoptera. If conserved genomic influences on sociality do exist, we need data from awider range of taxa that also vary in their levels of sociality. Here,we present the assembled and annotated genome of the subsocialbeetle Nicrophorus vespilloides, a species long used to investigate evolutionary questions of complex social behavior. We used thisgenome to address two questions. First, do aspects of life history, such as using a carcass to breed, predict overlap in gene modelsmore strongly than phylogeny? We found that the overlap in gene models was similar between N. vespilloides and all other insectgroups regardless of life history. Second, like other insects with highly developed social behavior but unlike other beetles, doesN. vespilloides have DNA methylation?We found strong evidence for an active DNA methylation system. The distribution of methylationwassimilar to other insects with exons having themostmethylatedCpGs. Methylation status appears highly conserved; 85%of themethylated genes in N. vespilloides are alsomethylated in the hymentopteran Nasonia vitripennis. The addition of this genomeadds a coleopteran resource to answer questions about the evolution and mechanistic basis of sociality and to address questionsabout the potential role of methylation in social behavior. Journal Article Genome Biology and Evolution 7 12 3383 3396 Oxford University Press (OUP) 1759-6653 burying beetle, epigenetics, parental care, sociality 9 10 2015 2015-10-09 10.1093/gbe/evv194 COLLEGE NANME Biosciences COLLEGE CODE SBI Swansea University 2017-08-14T15:55:51.4760993 2017-03-24T16:13:45.8509302 Faculty of Science and Engineering School of Biosciences, Geography and Physics - Biosciences C. B. Christopher 1 L. Ji 2 R. A. W. Wiberg 3 J. Shelton 4 E. C. McKinney 5 D. J. Parker 6 R. B. Meagher 7 K. M. Benowitz 8 E. M. Roy-Zokan 9 M. G. Ritchie 10 S. J. Brown 11 R. J. Schmitz 12 A. J. Moore 13 Chris Cunningham 0000-0003-3965-2076 14 0032676-28032017134450.pdf N_vespilloides_genome_methylome_Cunningham_2015.pdf 2017-03-28T13:44:50.2400000 Output 686841 application/pdf Version of Record true 2017-03-28T00:00:00.0000000 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/ ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. true eng
title The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)
spellingShingle The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)
Chris Cunningham
title_short The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)
title_full The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)
title_fullStr The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)
title_full_unstemmed The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)
title_sort The Genome and Methylome of a Beetle with Complex Social Behavior,Nicrophorus vespilloides(Coleoptera: Silphidae)
author_id_str_mv 0bd688baf9fc30cb39dfae9ed28cb662
author_id_fullname_str_mv 0bd688baf9fc30cb39dfae9ed28cb662_***_Chris Cunningham
author Chris Cunningham
author2 C. B. Christopher
L. Ji
R. A. W. Wiberg
J. Shelton
E. C. McKinney
D. J. Parker
R. B. Meagher
K. M. Benowitz
E. M. Roy-Zokan
M. G. Ritchie
S. J. Brown
R. J. Schmitz
A. J. Moore
Chris Cunningham
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container_issue 12
container_start_page 3383
publishDate 2015
institution Swansea University
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publisher Oxford University Press (OUP)
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department_str School of Biosciences, Geography and Physics - Biosciences{{{_:::_}}}Faculty of Science and Engineering{{{_:::_}}}School of Biosciences, Geography and Physics - Biosciences
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description Testing for conserved and novelmechanisms underlying phenotypic evolution requires a diversity of genomes available for comparisonspanning multiple independent lineages. For example, complex social behavior in insects has been investigated primarily witheusocial lineages, nearly all of which are Hymenoptera. If conserved genomic influences on sociality do exist, we need data from awider range of taxa that also vary in their levels of sociality. Here,we present the assembled and annotated genome of the subsocialbeetle Nicrophorus vespilloides, a species long used to investigate evolutionary questions of complex social behavior. We used thisgenome to address two questions. First, do aspects of life history, such as using a carcass to breed, predict overlap in gene modelsmore strongly than phylogeny? We found that the overlap in gene models was similar between N. vespilloides and all other insectgroups regardless of life history. Second, like other insects with highly developed social behavior but unlike other beetles, doesN. vespilloides have DNA methylation?We found strong evidence for an active DNA methylation system. The distribution of methylationwassimilar to other insects with exons having themostmethylatedCpGs. Methylation status appears highly conserved; 85%of themethylated genes in N. vespilloides are alsomethylated in the hymentopteran Nasonia vitripennis. The addition of this genomeadds a coleopteran resource to answer questions about the evolution and mechanistic basis of sociality and to address questionsabout the potential role of methylation in social behavior.
published_date 2015-10-09T03:40:07Z
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